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Biomedical Research and Integrated Biobanking: An Innovative by Massimiliano Izzo

By Massimiliano Izzo

This doctoral thesis stories on an cutting edge facts repository providing adaptive metadata administration to maximize details sharing and comprehension in multidisciplinary and geographically disbursed collaborations. It methods metadata as a fluid, loosely based and dynamical method instead of a set product, and describes the advance of a singular information administration platform in line with a schemaless JSON information version, which represents the 1st totally JSON-based metadata repository designed for the biomedical sciences. effects received in a variety of program situations (e.g. built-in biobanking, useful genomics and computational neuroscience) and corresponding functionality checks are mentioned on intimately. final yet now not least, the ebook bargains a scientific evaluation of knowledge systems accepted within the biomedical sciences, including a clean viewpoint at the function of and instruments for information sharing and heterogeneous facts integration in modern biomedical research.

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Client and server exchange messages using JSON through JSON-RPC protocol whenever possible. 2. A MySQL relational database. Database access from the web application is managed with MyBatis, a persistence framework that automates mapping between SQL databases and Java objects. The MyBatis persistence layer permits to adopt, if required, a different SQL RDMS (PostgreSQL, Oracle,. ) with moderate effort. The database contains all the information about projects, patients, data and everything related to the repository management (users, groups and accesses).

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Q. 22(1), 20–28 (2010) 11. 1. html (2014). Accessed 29 Jan 2015 12. : The Silmarillion. Random House LLC, New York (1979) 13. 1. org/documents/dces/ (2012). Accessed 29 Jan 2015 14. : Minimum information about a microarray experiment (MIAME) toward standards for microarray data. Nat. Genet. 29(4), 365–371 (2001) 15. : A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB. BMC Bioinform. 7(1), 489 (2006) 16. : Design and implementation of microarray gene expression markup language (MAGE-ML).

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